STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0305Endoglucanase, putative; Similar to GP:3560020 percent identity: 55.11; identified by sequence similarity; putative. (707 aa)    
Predicted Functional Partners:
TM_1074
Hypothetical protein; Identified by sequence similarity; putative.
  
 0.887
pelA
Pectate lyase; Cleaves unsaturated trigalacturonate from pectin. Activity is highest towards polygalacturonic acid, activity on methylated pectins decreases with an increasing degree of methylation.
 
 
 0.839
TM_0070
Endo-1,4-beta-xylanase B; Similar to PID:1143603 SP:Q60041 percent identity: 93.93; identified by sequence similarity; putative.
 
  
 0.830
TM_1227
Endo-1,4-beta-mannosidase; Similar to PID:1679597 percent identity: 54.44; identified by sequence similarity; putative.
 
   
 0.822
xynA
Similar to PID:559960 SP:Q60037 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative.
 
  
 0.816
TM_0306
alpha-L-fucosidase, putative; Similar to GB:M29877 SP:P04066 PID:1335066 PID:178409 PID:182779 percent identity: 56.91; identified by sequence similarity; putative.
       0.783
TM_0437
exo-poly-alpha-D-galacturonosidase, putative; Similar to GB:M31308 SP:P15922 PID:148447 percent identity: 49.48; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 28 family.
 
 0.778
TM_0307
L-fucose isomerase, putative; Similar to GB:L42023 SP:P44779 PID:1005445 PID:1220691 PID:1204865 percent identity: 56.91; identified by sequence similarity; putative.
       0.773
TM_1751
Endoglucanase; Similar to SP:P23340 percent identity: 52.35; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.739
TM_0302
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 57.09; identified by sequence similarity; putative.
       0.732
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.