STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0306alpha-L-fucosidase, putative; Similar to GB:M29877 SP:P04066 PID:1335066 PID:178409 PID:182779 percent identity: 56.91; identified by sequence similarity; putative. (449 aa)    
Predicted Functional Partners:
TM_0307
L-fucose isomerase, putative; Similar to GB:L42023 SP:P44779 PID:1005445 PID:1220691 PID:1204865 percent identity: 56.91; identified by sequence similarity; putative.
 
     0.813
TM_0305
Endoglucanase, putative; Similar to GP:3560020 percent identity: 55.11; identified by sequence similarity; putative.
       0.783
TM_0302
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 57.09; identified by sequence similarity; putative.
       0.732
TM_0303
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 76.00; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
       0.732
TM_0304
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 65.51; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
       0.732
TM_1062
Beta-glucuronidase; Similar to PID:642973 PID:14446 PID:412358 percent identity: 57.73; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 2 family.
   
 0.705
TM_0301
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 59.88; identified by sequence similarity; putative.
       0.680
TM_0280
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.667
TM_1061
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.665
TM_0281
alpha-L-arabinofuranosidase; Similar to SP:P94531 PID:1770022 PID:1913931 GB:AL009126 percent identity: 58.66; identified by sequence similarity; putative.
  
   
 0.600
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.