Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0313K+ channel, beta subunit; Similar to GP:1063415 percent identity: 73.75; identified by sequence similarity; putative. (319 aa)    
Predicted Functional Partners:
TM_0312
Conserved hypothetical protein; Similar to SP:Q04869 PID:984688 percent identity: 59.38; identified by sequence similarity; putative.
 
 
 0.839
TM_0311
Hypothetical protein; Identified by sequence similarity; putative.
       0.589
TM_1743
Oxidoreductase, aldo/keto reductase family; Similar to SP:P46905 PID:973332 PID:2415728 GB:AL009126 percent identity: 59.78; identified by sequence similarity; putative.
 
0.526
TM_1009
Oxidoreductase, aldo/keto reductase family; Similar to GB:AL009126 percent identity: 69.23; identified by sequence similarity; putative.
  
 0.427
TM_0310
beta-D-galactosidase; Similar to GB:L03424 PID:551691 percent identity: 68.26; identified by sequence similarity; putative.
       0.419
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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