STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0324Conserved hypothetical protein; Similar to GB:L42023 SP:P44993 PID:1006258 PID:1221144 PID:1205278 percent identity: 60.62; identified by sequence similarity; putative. (427 aa)    
Predicted Functional Partners:
TM_0322
ABC transporter, periplasmic substrate-binding protein, putative; Similar to SP:P37735 GB:X63974 PID:46006 percent identity: 56.07; identified by sequence similarity; putative.
 
 
 0.903
TM_0325
Oxidoreductase, short chain dehydrogenase/reductase family; Similar to GB:X73124 SP:P39640 PID:414006 GB:AL009126 percent identity: 57.94; identified by sequence similarity; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.798
TM_0326
Transcriptional regulator, RpiR family; Similar to SP:P46118 PID:881368 GB:U00096 PID:1736496 PID:1788159 percent identity: 56.94; identified by sequence similarity; putative.
       0.763
TM_0327
Phosphoglycerate dehydrogenase, putative; Similar to GB:Pyro_h percent identity: 68.84; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.723
TM_0328
m4C-methyltransferase; Similar to GB:AE000511 PID:2313355 percent identity: 58.37; identified by sequence similarity; putative; Belongs to the N(4)/N(6)-methyltransferase family.
  
    0.481
TM_1164
2-oxoacid ferredoxin oxidoreductase, alpha subunit; Similar to GB:AE000666 percent identity: 68.99; identified by sequence similarity; putative.
     
 0.456
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.