Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0383NADH oxidoreductase, putative; Similar to GB:AE000666 percent identity: 74.44; identified by sequence similarity; putative. (166 aa)    
Predicted Functional Partners:
TM_0382
Repair endonuclease, putative; Similar to GB:L77117 PID:1592082 percent identity: 69.71; identified by sequence similarity; putative.
       0.572
TM_0384
Anaerobic ribonucleoside-triphosphate reductase-related protein; Similar to SP:P07075 PID:15354 percent identity: 53.92; identified by sequence similarity; putative.
       0.497
TM_0385
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 52.27; identified by sequence similarity; putative.
       0.497
TM_0386
Bacterioferritin comigratory protein/NADH dehydrogenase; Similar to PID:1651777 percent identity: 59.42; identified by sequence similarity; putative.
 
  
0.448
TM_0268
5-methyltetrahydrofolate S-homocysteine methyltransferase; Similar to GB:U00017 PID:466997 percent identity: 54.29; identified by sequence similarity; putative.
  
  
 0.423
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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