STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0387Conserved hypothetical protein; Similar to PID:1707843 percent identity: 55.56; identified by sequence similarity; putative. (336 aa)    
Predicted Functional Partners:
TM_0389
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 65.97; identified by sequence similarity; putative.
 
 
  0.961
TM_0388
Conserved hypothetical protein; Similar to PID:1707843 percent identity: 51.10; identified by sequence similarity; putative.
 
  
 
0.901
TM_1404
Antibiotic ABC transporter, transmembrane protein, putative; Similar to GB:AE000782 percent identity: 77.87; identified by sequence similarity; putative.
  
  
  0.766
TM_1403
Antibiotic ABC transporter, ATP-binding protein, putative; Similar to GB:Pyro_h percent identity: 85.85; identified by sequence similarity; putative.
 
 
  0.758
TM_1100
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 52.78; identified by sequence similarity; putative.
 
  
 0.593
TM_0793
ABC transporter, ATP-binding protein; Similar to PID:1707742 percent identity: 64.94; identified by sequence similarity; putative.
 
 
  0.582
TM_1326
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 56.56; identified by sequence similarity; putative.
  
  
 
0.497
TM_0543
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 59.61; identified by sequence similarity; putative.
 
 
 0.482
TM_1306
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 55.75; identified by sequence similarity; putative.
  
     0.480
TM_0460
Oligopeptide ABC transporter, periplasmic oligo-peptide binding protein, putative; Similar to GB:U00096 PID:1742427 PID:1742438 PID:1787762 percent identity: 48.21; identified by sequence similarity; putative.
  
  
  0.470
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.