STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0389ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 65.97; identified by sequence similarity; putative. (301 aa)    
Predicted Functional Partners:
TM_0387
Conserved hypothetical protein; Similar to PID:1707843 percent identity: 55.56; identified by sequence similarity; putative.
 
 
  0.961
TM_0388
Conserved hypothetical protein; Similar to PID:1707843 percent identity: 51.10; identified by sequence similarity; putative.
 
 
  0.961
TM_0705
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 73.61; identified by sequence similarity; putative.
 
 
0.920
TM_1029
ABC transporter, permease protein, putative; Similar to SP:P42333 percent identity: 50.27; identified by sequence similarity; putative.
  
 0.734
TM_1137
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D90223 SP:P21628 GB:M64046 PID:216865 percent identity: 62.72; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
   
  0.726
TM_1404
Antibiotic ABC transporter, transmembrane protein, putative; Similar to GB:AE000782 percent identity: 77.87; identified by sequence similarity; putative.
 
  0.717
TM_0764
Hypothetical protein; Identified by sequence similarity; putative.
  
 0.564
TM_0592
Amino acid ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 72.86; identified by sequence similarity; putative.
   
  0.532
TM_1138
Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:D12589 SP:P30293 GB:X52093 PID:217074 percent identity: 74.02; identified by sequence similarity; putative.
   
 
0.512
TM_1326
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 56.56; identified by sequence similarity; putative.
 
 
  0.428
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.