STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0393Transcriptional regulator, XylR-related; Similar to GP:580652 percent identity: 52.26; identified by sequence similarity; putative. (371 aa)    
Predicted Functional Partners:
TM_0392
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 72.39; identified by sequence similarity; putative.
       0.815
TM_0032
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 51.23; identified by sequence similarity; putative.
  
 
 0.802
TM_1847
ROK family protein; Similar to GB:M27248 SP:P16557 PID:143841 PID:580652 PID:1750123 percent identity: 52.86; identified by sequence similarity; putative.
  
     0.765
glk
Glucokinase; Catalyzes the phosphorylation of D-glucose to D-glucose 6- phosphate using ATP as the phosphate donor. Can also phosphorylate 2- deoxyglucose, with lower efficiency. ITP can also serve as a phosphoryl donor.
  
     0.752
TM_0432
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GB:M77351 SP:Q00749 PID:153737 percent identity: 55.25; identified by sequence similarity; putative.
 
    0.471
TM_0110
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 59.47; identified by sequence similarity; putative.
  
   
0.452
TM_1224
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 54.86; identified by sequence similarity; putative.
  
   
0.446
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.