Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0419Sugar ABC transporter, permease protein; Similar to GB:AL009126 percent identity: 54.04; identified by sequence similarity; putative. (294 aa)    
Predicted Functional Partners:
TM_0420
Sugar ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 64.75; identified by sequence similarity; putative.
 
  0.996
TM_0421
Sugar ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 71.03; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  0.995
TM_0418
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to PID:1850900 GB:AE000512 percent identity: 47.11; identified by sequence similarity; putative.
 
  0.994
TM_1836
Maltose ABC transporter, permease protein; Similar to SP:P07622 PID:396367 PID:41951 GB:U00096 PID:1790464 percent identity: 67.01; identified by sequence similarity; putative.
 
 0.880
TM_0430
Sugar ABC transporter, permease protein; Similar to PID:2337835 percent identity: 59.85; identified by sequence similarity; putative.
  
  0.878
TM_0812
Sugar ABC transporter, permease protein, putative; Similar to PID:1652996 percent identity: 63.26; identified by sequence similarity; putative.
  
  0.878
TM_1122
Glycerol-3-phosphate ABC transporter, permease protein; Similar to SP:P10906 GB:U00039 PID:43248 PID:466587 GB:U00096 percent identity: 59.48; identified by sequence similarity; putative.
  
  0.878
TM_1853
Sugar ABC transporter, permease protein; Similar to GB:X66092 PID:296356 percent identity: 66.04; identified by sequence similarity; putative.
  
  0.878
TM_0598
Sugar ABC transporter, permease protein; Similar to PID:1652996 percent identity: 64.22; identified by sequence similarity; putative.
  
  0.877
TM_0279
Sugar ABC transporter, permease protein; Similar to PID:2293416 percent identity: 61.48; identified by sequence similarity; putative.
  
  0.869
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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