STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0425Oxidoreductase, putative; Similar to GB:AL009126 percent identity: 48.08; identified by sequence similarity; putative. (328 aa)    
Predicted Functional Partners:
TM_0426
PHT4-related protein; Similar to GB:D13229 PID:295711 percent identity: 54.73; identified by sequence similarity; putative.
 
     0.956
TM_0427
Oxidoreductase, putative; Similar to GB:AE000657 percent identity: 45.06; identified by sequence similarity; putative.
 
    0.804
TM_0428
Oxidoreductase, putative; Similar to GB:AE000782 percent identity: 49.25; identified by sequence similarity; putative.
 
     0.764
TM_0424
Conserved hypothetical protein; Similar to GB:L77117 PID:1591686 percent identity: 56.51; identified by sequence similarity; putative.
       0.752
mcp1
Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation.
       0.721
TM_0430
Sugar ABC transporter, permease protein; Similar to PID:2337835 percent identity: 59.85; identified by sequence similarity; putative.
       0.662
TM_0431
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 56.20; identified by sequence similarity; putative.
       0.649
TM_0432
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GB:M77351 SP:Q00749 PID:153737 percent identity: 55.25; identified by sequence similarity; putative.
 
     0.588
lysS
lysyl-tRNA synthetase; Similar to PID:567884 SP:Q53638 percent identity: 72.67; identified by sequence similarity; putative; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.550
TM_0436
Alcohol dehydrogenase, zinc-containing; Similar to PIR:S34613 percent identity: 51.75; identified by sequence similarity; putative.
 
 
  0.466
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.