STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0460Oligopeptide ABC transporter, periplasmic oligo-peptide binding protein, putative; Similar to GB:U00096 PID:1742427 PID:1742438 PID:1787762 percent identity: 48.21; identified by sequence similarity; putative. (614 aa)    
Predicted Functional Partners:
TM_0503
Oligopeptide ABC transporter, permease protein; Similar to SP:P42062 PID:677946 GB:AL009126 percent identity: 62.50; identified by sequence similarity; putative.
 
  0.833
TM_0502
Oligopeptide ABC transporter, permease protein; Similar to SP:P42063 PID:677947 GB:AL009126 percent identity: 63.90; identified by sequence similarity; putative.
 
  0.816
TM_1149
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 78.21; identified by sequence similarity; putative.
  
  0.706
TM_1153
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 78.39; identified by sequence similarity; putative.
  
  0.665
TM_0470
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 49.84; identified by sequence similarity; putative.
 
     0.642
TM_1075
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.641
TM_1746
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000783 percent identity: 56.54; identified by sequence similarity; putative.
 
 
 0.598
dnaE
DNA polymerase III, alpha subunit, putative; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily.
       0.595
TM_0466
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 76.00; identified by sequence similarity; putative.
       0.591
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.590
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.