STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0484Pyrimidine precursor biosynthesis enzyme, putative; Similar to SP:P42883 SP:P43534 SP:P47183 PID:1015913 PID:1302455 percent identity: 52.16; identified by sequence similarity; putative. (316 aa)    
Predicted Functional Partners:
TM_0485
ABC transporter, permease protein, cysTW family; Similar to GB:L42023 PID:1003598 PID:1222281 PID:1204605 SP:Q57306 percent identity: 52.16; identified by sequence similarity; putative.
 
 0.997
TM_0483
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 66.35; identified by sequence similarity; putative.
 
 0.988
TM_0486
Conserved hypothetical protein; Similar to GB:U04966 PID:498839 percent identity: 72.63; identified by sequence similarity; putative.
 
   
 0.971
TM_0204
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 68.28; identified by sequence similarity; putative.
 
 0.768
TM_0203
ABC transporter, permease protein, cysTW family; Similar to PID:2440148 percent identity: 50.22; identified by sequence similarity; putative.
 
 
 0.736
TM_0487
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 69.00; identified by sequence similarity; putative.
     
 0.683
prmC
hemK protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.556
TM_1432
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 54.61; identified by sequence similarity; putative.
  
 
 0.414
TM_0201
NADP-reducing hydrogenase, subunit D, putative; Similar to GB:U07229 PID:466366 percent identity: 69.31; identified by sequence similarity; putative.
    
 0.413
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.