STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0498Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:L42023 SP:P45052 PID:1006435 PID:1221241 PID:1205367 percent identity: 72.41; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (333 aa)    
Predicted Functional Partners:
TM_0502
Oligopeptide ABC transporter, permease protein; Similar to SP:P42063 PID:677947 GB:AL009126 percent identity: 63.90; identified by sequence similarity; putative.
 
  0.989
TM_1748
Oligopeptide ABC transporter, permease protein; Similar to GB:M57689 SP:P24139 GB:X56347 PID:143606 PID:40007 percent identity: 64.69; identified by sequence similarity; putative.
 
 
  0.970
TM_1153
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 78.39; identified by sequence similarity; putative.
 
 
  0.941
TM_0059
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 65.90; identified by sequence similarity; putative.
 
 
 
  0.910
TM_1221
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 72.40; identified by sequence similarity; putative.
 
 
 
  0.907
TM_1065
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000657 percent identity: 67.80; identified by sequence similarity; putative.
 
 
 
  0.883
TM_0500
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42065 PID:677944 GB:AL009126 percent identity: 79.56; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 
 
0.881
TM_0533
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 71.65; identified by sequence similarity; putative.
 
  0.851
TM_0503
Oligopeptide ABC transporter, permease protein; Similar to SP:P42062 PID:677946 GB:AL009126 percent identity: 62.50; identified by sequence similarity; putative.
  0.833
TM_0497
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 53.87; identified by sequence similarity; putative.
       0.810
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.