STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0510Iron-dependent transcriptional repressor, putative; Similar to GP:2624310 percent identity: 62.63; identified by sequence similarity; putative. (172 aa)    
Predicted Functional Partners:
tmung
Conserved hypothetical protein; Removes uracil bases that are present in DNA as a result of either deamination of cytosine or misincorporation of dUMP instead of dTMP. Can remove uracil from double-stranded DNA containing either a U/G or U/A base pair as well as from single-stranded DNA. Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.
       0.827
TM_0508
Conserved hypothetical protein; Similar to GP:2829884 percent identity: 63.36; identified by sequence similarity; putative; In the N-terminal section; belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.
       0.825
TM_0509
UDP-glucose 4-epimerase, putative; Similar to GB:L77117 SP:Q57664 PID:1590951 percent identity: 68.85; identified by sequence similarity; putative.
     
 0.813
TM_0602
Iron-dependent transcriptional repressor, putative; Similar to PID:1171107 PID:2182002 GB:AL123456 percent identity: 45.04; identified by sequence similarity; putative.
  
     0.715
TM_0512
Hypothetical protein; Identified by sequence similarity; putative.
       0.562
TM_0125
Zinc ABC transporter, permease protein; Part of an ATP-driven transport system TM_0123/TM_0124/TM_0125 for a metal; Belongs to the ABC-3 integral membrane protein family.
  
 
 0.452
TM_0123
Zinc ABC transporter, periplasmic zinc-binding protein; Part of an ATP-driven transport system TM_0123/TM_0124/TM_0125 for a metal. Metal-binding component; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.442
TM_0124
Zinc ABC transporter, ATP-binding protein; Part of an ATP-driven transport system TM_0123/TM_0124/TM_0125 for a metal. Probably responsible for energy coupling to the transport system.
  
 
 0.432
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.