Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0532Oligopeptide ABC transporter, permease protein; Similar to PID:1001492 PID:1001545 percent identity: 69.16; identified by sequence similarity; putative. (321 aa)    
Predicted Functional Partners:
TM_0533
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 71.65; identified by sequence similarity; putative.
   0.973
TM_0531
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 60.12; identified by sequence similarity; putative.
 
   0.931
TM_1150
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000782 percent identity: 66.76; identified by sequence similarity; putative.
 
   0.899
TM_1153
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 78.39; identified by sequence similarity; putative.
 
   0.895
TM_0502
Oligopeptide ABC transporter, permease protein; Similar to SP:P42063 PID:677947 GB:AL009126 percent identity: 63.90; identified by sequence similarity; putative.
   0.882
TM_1197
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 62.46; identified by sequence similarity; putative.
 
   0.840
TM_0530
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42065 PID:677944 GB:AL009126 percent identity: 73.60; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
 0.824
TM_0059
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 65.90; identified by sequence similarity; putative.
 
   0.822
TM_1221
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 72.40; identified by sequence similarity; putative.
 
   0.822
TM_0029
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 70.18; identified by sequence similarity; putative.
 
   0.818
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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