STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0559Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 78.41; identified by sequence similarity; putative. (243 aa)    
Predicted Functional Partners:
TM_0560
Conserved hypothetical protein; Similar to PID:1707687 percent identity: 74.16; identified by sequence similarity; putative; Belongs to the Dps family.
       0.528
carB
Carbamoyl-phosphate synthase, large subunit; Similar to GB:AE000782 percent identity: 78.50; identified by sequence similarity; putative.
       0.485
carA
Carbamoyl-phosphate synthetase, small subunit; Similar to GB:AE000657 percent identity: 75.35; identified by sequence similarity; putative; Belongs to the CarA family.
       0.485
TM_1055
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 71.79; identified by sequence similarity; putative.
     
 0.453
corA
Divalent cation transport-related protein; Mediates influx of magnesium ions. Mediates Co(2+) uptake. Has high selectivity for Co(2+). Alternates between open and closed states. Activated by low cytoplasmic Mg(2+) levels. Inactive when cytoplasmic Mg(2+) levels are high. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
    0.430
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.