STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0585Lipopolysaccharide biosynthesis protein BplA; Similar to PID:992971 percent identity: 58.43; identified by sequence similarity; putative. (360 aa)    
Predicted Functional Partners:
TM_0583
Lipopolysaccharide biosynthesis protein; Similar to GB:Pyro_h percent identity: 71.97; identified by sequence similarity; putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.980
TM_0584
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 60.14; identified by sequence similarity; putative.
       0.813
ppaC
Conserved hypothetical protein; Similar to GB:D26185 SP:P37487 PID:467340 GB:AL009126 percent identity: 60.32; identified by sequence similarity; putative.
   
   0.789
TM_0586
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 57.14; identified by sequence similarity; putative.
       0.780
TM_0759
Acyltransferase, putative; Similar to GB:AE000666 percent identity: 63.45; identified by sequence similarity; putative.
 
  
  0.680
TM_0760
Lipopolysaccharide biosynthesis protein, putative; Similar to PID:1545859 percent identity: 44.91; identified by sequence similarity; putative.
  
    0.661
TM_0588
Rod shape-determining protein MreB; Similar to SP:Q01465 percent identity: 77.06; identified by sequence similarity; putative.
  
    0.573
TM_0668
Pleiotropic regulatory protein; Similar to GB:M29002 SP:P15263 PID:142840 percent identity: 74.53; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.551
lysS
lysyl-tRNA synthetase; Similar to PID:567884 SP:Q53638 percent identity: 72.67; identified by sequence similarity; putative; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.550
TM_0610
Lipopolysaccharide biosynthesis protein; Similar to PID:992974 percent identity: 66.29; identified by sequence similarity; putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.419
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.