STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0588Rod shape-determining protein MreB; Similar to SP:Q01465 percent identity: 77.06; identified by sequence similarity; putative. (336 aa)    
Predicted Functional Partners:
TM_1864
Hypothetical protein; Identified by sequence similarity; putative.
   
 
 0.963
TM_0590
Penicillin-binding protein 2; Similar to GB:AE000657 percent identity: 55.31; identified by sequence similarity; putative.
 
 
 0.869
TM_0839
Rod shape-determining protein RodA; Similar to GB:AE000657 percent identity: 63.05; identified by sequence similarity; putative; Belongs to the SEDS family.
 
 
 0.765
TM_0233
Cell division protein, rodA/ftsW/spoVE family; Similar to GB:AE000511 SP:P56096 PID:2314744 percent identity: 58.44; identified by sequence similarity; putative; Belongs to the SEDS family.
 
 
 0.639
ppaC
Conserved hypothetical protein; Similar to GB:D26185 SP:P37487 PID:467340 GB:AL009126 percent identity: 60.32; identified by sequence similarity; putative.
   
   0.615
TM_0585
Lipopolysaccharide biosynthesis protein BplA; Similar to PID:992971 percent identity: 58.43; identified by sequence similarity; putative.
  
    0.573
TM_0584
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 60.14; identified by sequence similarity; putative.
       0.569
TM_0586
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 57.14; identified by sequence similarity; putative.
       0.569
TM_1277
Cell division protein FtsA, putative; Similar to GB:AE000657 percent identity: 49.73; identified by sequence similarity; putative.
  
 
 0.538
tig
Trigger factor, putative; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (By similarity).
  
   0.537
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.