STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0593Amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to GB:AE000782 percent identity: 64.68; identified by sequence similarity; putative. (246 aa)    
Predicted Functional Partners:
TM_0592
Amino acid ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 72.86; identified by sequence similarity; putative.
 0.999
TM_0591
Amino acid ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 80.08; identified by sequence similarity; putative.
 0.998
TM_0155
Chorismate mutase/prephenate dehydratase; Similar to GB:AE000782 percent identity: 80.45; identified by sequence similarity; putative.
    
 0.693
TM_0594
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57772 PID:1591045 percent identity: 76.92; identified by sequence similarity; putative.
       0.651
TM_0595
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to SP:P10904 GB:U00039 GB:M33735 PID:43244 PID:466589 percent identity: 48.57; identified by sequence similarity; putative.
  
 
 0.602
TM_1184
pleD-related protein; Similar to PID:1652841 percent identity: 50.78; identified by sequence similarity; putative.
   
 0.546
TM_1359
Sensor histidine kinase; Similar to GB:L13078 SP:Q06067 PID:290419 GB:U00096 PID:1736874 percent identity: 56.58; identified by sequence similarity; putative.
    
 0.493
TM_0596
Sugar ABC transporter, permease protein; Similar to PID:2337834 percent identity: 61.03; identified by sequence similarity; putative.
    
 0.454
TM_0597
Hypothetical protein; Identified by sequence similarity; putative.
    
 0.454
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.