STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0599Hypothetical protein; Identified by sequence similarity; putative. (546 aa)    
Predicted Functional Partners:
TM_0600
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 55.93; identified by sequence similarity; putative.
       0.810
TM_0601
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_0602
Iron-dependent transcriptional repressor, putative; Similar to PID:1171107 PID:2182002 GB:AL123456 percent identity: 45.04; identified by sequence similarity; putative.
 
    0.769
TM_0598
Sugar ABC transporter, permease protein; Similar to PID:1652996 percent identity: 64.22; identified by sequence similarity; putative.
       0.765
TM_1878
UDP-sugar hydrolase; Similar to SP:P07024 PID:757842 GB:U00096 PID:1773162 PID:1786687 percent identity: 62.97; identified by sequence similarity; putative; Belongs to the 5'-nucleotidase family.
      0.569
TM_1704
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.566
TM_1013
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.559
TM_1023
Conserved hypothetical protein; Similar to PID:992558 percent identity: 53.12; identified by sequence similarity; putative.
  
     0.534
TM_1303
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 48.73; identified by sequence similarity; putative.
  
     0.521
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.517
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.