STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0606Hypothetical protein; Identified by sequence similarity; putative. (115 aa)    
Predicted Functional Partners:
TM_1545
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
    0.739
TM_0607
Hypothetical protein; Identified by sequence similarity; putative.
       0.526
TM_0608
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 56.60; identified by sequence similarity; putative.
       0.526
TM_0609
Hypothetical protein; Identified by sequence similarity; putative.
       0.526
TM_0610
Lipopolysaccharide biosynthesis protein; Similar to PID:992974 percent identity: 66.29; identified by sequence similarity; putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.526
TM_0611
Hypothetical protein; Identified by sequence similarity; putative.
       0.453
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.