STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0610Lipopolysaccharide biosynthesis protein; Similar to PID:992974 percent identity: 66.29; identified by sequence similarity; putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (374 aa)    
Predicted Functional Partners:
TM_0583
Lipopolysaccharide biosynthesis protein; Similar to GB:Pyro_h percent identity: 71.97; identified by sequence similarity; putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 0.976
TM_0609
Hypothetical protein; Identified by sequence similarity; putative.
  
    0.809
TM_0607
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_0608
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 56.60; identified by sequence similarity; putative.
       0.773
TM_0644
Hypothetical protein; Identified by sequence similarity; putative.
    
 0.741
TM_0611
Hypothetical protein; Identified by sequence similarity; putative.
       0.655
TM_0631
Lipopolysaccharide biosynthesis protein; Similar to GP:1773351 percent identity: 45.89; identified by sequence similarity; putative.
 
    0.639
TM_0620
Lipopolysaccharide biosynthesis protein; Similar to GP:1276886 percent identity: 50.35; identified by sequence similarity; putative.
  
  
 0.597
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
  
  
 0.579
TM_0760
Lipopolysaccharide biosynthesis protein, putative; Similar to PID:1545859 percent identity: 44.91; identified by sequence similarity; putative.
 
    0.561
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.