STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0622Lipopolysaccharide biosynthesis protein, putative; Similar to GP:2983976 percent identity: 57.73; identified by sequence similarity; putative. (388 aa)    
Predicted Functional Partners:
TM_0630
Nucleotide sugar epimerase, putative; Similar to GB:AE000666 percent identity: 74.92; identified by sequence similarity; putative.
 
 
 0.761
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
 
 0.665
TM_0509
UDP-glucose 4-epimerase, putative; Similar to GB:L77117 SP:Q57664 PID:1590951 percent identity: 68.85; identified by sequence similarity; putative.
  
 0.650
TM_0632
Extracellular polysaccharide biosynthesis-related protein; Similar to GB:U00096 SP:P71241 PID:1407618 PID:1736749 PID:1736753 percent identity: 62.22; identified by sequence similarity; putative.
  
 0.621
TM_0623
Hypothetical protein; Identified by sequence similarity; putative.
       0.543
TM_0862
Glucose-1-phosphate thymidylyltransferase; Similar to PID:1001492 PID:1001590 percent identity: 71.27; identified by sequence similarity; putative.
 
 
 0.539
TM_0624
N-acetylglucosaminyl-phosphatidylinositol biosynthesis-related protein; Similar to PID:441475 percent identity: 43.53; identified by sequence similarity; putative.
 
    
0.519
TM_1638
ABC transporter, ATP-binding protein; Similar to GB:AE000783 percent identity: 57.47; identified by sequence similarity; putative.
  
   0.489
TM_0627
Lipopolysaccharide biosynthesis protein; Similar to GB:AE000657 percent identity: 60.87; identified by sequence similarity; putative.
 
    
0.460
TM_1548
Lipopolysaccharide biosynthesis protein; Similar to GP:1773343 percent identity: 61.19; identified by sequence similarity; putative.
 
  
 0.411
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.