STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0626Hypothetical protein; Identified by sequence similarity; putative. (381 aa)    
Predicted Functional Partners:
TM_0627
Lipopolysaccharide biosynthesis protein; Similar to GB:AE000657 percent identity: 60.87; identified by sequence similarity; putative.
    
 0.799
TM_0625
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_0628
Hypothetical protein; Identified by sequence similarity; putative.
    
 0.721
TM_0631
Lipopolysaccharide biosynthesis protein; Similar to GP:1773351 percent identity: 45.89; identified by sequence similarity; putative.
    
 0.717
TM_0630
Nucleotide sugar epimerase, putative; Similar to GB:AE000666 percent identity: 74.92; identified by sequence similarity; putative.
     
 0.703
TM_0629
Hypothetical protein; Identified by sequence similarity; putative.
       0.686
TM_0632
Extracellular polysaccharide biosynthesis-related protein; Similar to GB:U00096 SP:P71241 PID:1407618 PID:1736749 PID:1736753 percent identity: 62.22; identified by sequence similarity; putative.
       0.681
TM_0633
Flagellar-related protein; Similar to PID:2443632 percent identity: 54.81; identified by sequence similarity; putative.
       0.612
TM_0624
N-acetylglucosaminyl-phosphatidylinositol biosynthesis-related protein; Similar to PID:441475 percent identity: 43.53; identified by sequence similarity; putative.
    
 0.571
TM_0634
Hypothetical protein; Identified by sequence similarity; putative.
       0.516
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.