STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0638Polysaccharide export protein, putative; Similar to PID:1107917 PID:1107923 percent identity: 49.47; identified by sequence similarity; putative. (992 aa)    
Predicted Functional Partners:
TM_0644
Hypothetical protein; Identified by sequence similarity; putative.
 
 0.997
TM_0632
Extracellular polysaccharide biosynthesis-related protein; Similar to GB:U00096 SP:P71241 PID:1407618 PID:1736749 PID:1736753 percent identity: 62.22; identified by sequence similarity; putative.
 
 
 0.869
TM_0806
Hypothetical protein; Identified by sequence similarity; putative.
 
  
 0.859
TM_1548
Lipopolysaccharide biosynthesis protein; Similar to GP:1773343 percent identity: 61.19; identified by sequence similarity; putative.
  
 
 0.828
TM_0639
Hypothetical protein; Identified by sequence similarity; putative.
       0.783
TM_0643
Clostripain-related protein; Similar to SP:P09870 PID:40528 percent identity: 49.04; identified by sequence similarity; putative.
 
     0.763
TM_1593
Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.756
TM_0641
Hypothetical protein; Identified by sequence similarity; putative.
       0.755
TM_0642
Hypothetical protein; Identified by sequence similarity; putative.
       0.755
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
 
  
 0.755
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.