STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0643Clostripain-related protein; Similar to SP:P09870 PID:40528 percent identity: 49.04; identified by sequence similarity; putative. (468 aa)    
Predicted Functional Partners:
TM_1716
Hypothetical protein; Identified by sequence similarity; putative.
   
 
 0.824
TM_0638
Polysaccharide export protein, putative; Similar to PID:1107917 PID:1107923 percent identity: 49.47; identified by sequence similarity; putative.
 
     0.763
TM_0640
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 54.14; identified by sequence similarity; putative.
       0.737
TM_0641
Hypothetical protein; Identified by sequence similarity; putative.
       0.737
TM_0642
Hypothetical protein; Identified by sequence similarity; putative.
       0.737
TM_0639
Hypothetical protein; Identified by sequence similarity; putative.
       0.707
TM_0088
comE protein, putative; Similar to SP:P31772 GB:L42023 PID:1003754 PID:1222365 PID:148874 percent identity: 65.23; identified by sequence similarity; putative; Belongs to the bacterial secretin family.
 
  
 0.703
TM_0984
Hypothetical protein; Protects the bacterial cell from peptidases.
  
     0.687
murJ
Virulence factor MviN-related protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
  
 
 
 0.587
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
    
 0.554
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.