STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0668Pleiotropic regulatory protein; Similar to GB:M29002 SP:P15263 PID:142840 percent identity: 74.53; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family. (377 aa)    
Predicted Functional Partners:
TM_1548
Lipopolysaccharide biosynthesis protein; Similar to GP:1773343 percent identity: 61.19; identified by sequence similarity; putative.
 
 0.940
TM_0667
Conserved hypothetical protein; Similar to GB:D26185 SP:P37545 PID:467428 GB:AL009126 percent identity: 64.14; identified by sequence similarity; putative.
       0.813
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
  
 
 0.811
TM_0759
Acyltransferase, putative; Similar to GB:AE000666 percent identity: 63.45; identified by sequence similarity; putative.
  0.750
TM_0666
Serine acetyltransferase; Similar to SP:P77985 percent identity: 59.90; identified by sequence similarity; putative.
  
 
 0.697
TM_0632
Extracellular polysaccharide biosynthesis-related protein; Similar to GB:U00096 SP:P71241 PID:1407618 PID:1736749 PID:1736753 percent identity: 62.22; identified by sequence similarity; putative.
  
 
 0.580
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.561
TM_0583
Lipopolysaccharide biosynthesis protein; Similar to GB:Pyro_h percent identity: 71.97; identified by sequence similarity; putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.552
TM_0630
Nucleotide sugar epimerase, putative; Similar to GB:AE000666 percent identity: 74.92; identified by sequence similarity; putative.
 
 
 0.552
TM_0585
Lipopolysaccharide biosynthesis protein BplA; Similar to PID:992971 percent identity: 58.43; identified by sequence similarity; putative.
 
 0.551
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.