STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0668Pleiotropic regulatory protein; Similar to GB:M29002 SP:P15263 PID:142840 percent identity: 74.53; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family. (377 aa)    
Predicted Functional Partners:
TM_1548
Lipopolysaccharide biosynthesis protein; Similar to GP:1773343 percent identity: 61.19; identified by sequence similarity; putative.
 
 0.938
TM_0667
Conserved hypothetical protein; Similar to GB:D26185 SP:P37545 PID:467428 GB:AL009126 percent identity: 64.14; identified by sequence similarity; putative.
       0.810
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
  
 
 0.786
TM_0759
Acyltransferase, putative; Similar to GB:AE000666 percent identity: 63.45; identified by sequence similarity; putative.
  0.753
TM_0585
Lipopolysaccharide biosynthesis protein BplA; Similar to PID:992971 percent identity: 58.43; identified by sequence similarity; putative.
 
 0.695
TM_0666
Serine acetyltransferase; Similar to SP:P77985 percent identity: 59.90; identified by sequence similarity; putative.
  
 
 0.681
TM_0862
Glucose-1-phosphate thymidylyltransferase; Similar to PID:1001492 PID:1001590 percent identity: 71.27; identified by sequence similarity; putative.
  
  
 0.570
TM_0610
Lipopolysaccharide biosynthesis protein; Similar to PID:992974 percent identity: 66.29; identified by sequence similarity; putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.561
TM_1034
UDP-N-acetylglucosamine 2-epimerase; Similar to GB:M87049 SP:P27828 GB:L18799 PID:148189 PID:304919 percent identity: 74.59; identified by sequence similarity; putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.561
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.555
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.