STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0672Hypothetical protein; Identified by sequence similarity; putative. (647 aa)    
Predicted Functional Partners:
TM_0673
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
 
 0.993
TM_0671
M-related protein; Similar to GP:1263021 percent identity: 47.40; identified by sequence similarity; putative.
  
  
 0.985
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheX chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
  
  
 0.964
TM_0678
Flagellar protein, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.962
TM_0221
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.952
fliG
Flagellar motor switch protein FliG; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
  
  
 0.912
TM_0218
Flagellum-specific ATP synthase; Similar to GB:M72718 SP:P23445 GB:X56049 PID:142899 PID:580859 percent identity: 76.56; identified by sequence similarity; putative.
  
  
 0.905
TM_0219
Flagellar export/assembly protein; Similar to PID:2105150 percent identity: 58.22; identified by sequence similarity; putative.
  
  
 0.905
TM_1364
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.905
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.904
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.