STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0673Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. (224 aa)    
Predicted Functional Partners:
fliE
Flagellar hook-basal body complex protein FliE; Similar to GB:M54965 SP:P24502 PID:142917 GB:AL009126 percent identity: 66.67; identified by sequence similarity; putative.
 
 
 0.996
TM_1365
Flagellar basal-body rod protein FlgC; Similar to PID:1165277 PID:1196316 SP:Q57466 GB:AE000783 percent identity: 72.46; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
 
 0.995
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.995
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.994
TM_0672
Hypothetical protein; Identified by sequence similarity; putative.
  
 
 0.993
TM_1364
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.993
TM_0083
Flagellar hook-associated protein 1; Similar to SP:P70859 PID:1518046 GB:AE000783 percent identity: 49.92; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
  
 0.984
TM_0221
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.983
TM_1542
Flagellar basal-body rod protein FlgG; Similar to GB:AE000657 percent identity: 75.19; identified by sequence similarity; putative.
 
 
 0.978
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheX chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
  
 0.975
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.