Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0708Conserved hypothetical protein; Similar to SP:P54511 PID:1303894 GB:AL009126 percent identity: 56.52; identified by sequence similarity; putative. (236 aa)    
Predicted Functional Partners:
TM_1877
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.46; identified by sequence similarity; putative.
 
  
  0.976
TM_0243
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.74; identified by sequence similarity; putative.
 
  
  0.974
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 0.963
TM_0802
3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
    
 0.885
TM_0800
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 62.64; identified by sequence similarity; putative.
     
  0.876
rsmI
Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.819
TM_0710
Transcriptional regulator, MarR family; Similar to GB:AL009126 percent identity: 57.04; identified by sequence similarity; putative.
       0.819
rsmG
Glucose-inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.817
TM_0711
Hypothetical protein; Identified by sequence similarity; putative.
       0.678
TM_0712
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 55.24; identified by sequence similarity; putative.
       0.610
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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