STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0760Lipopolysaccharide biosynthesis protein, putative; Similar to PID:1545859 percent identity: 44.91; identified by sequence similarity; putative. (398 aa)    
Predicted Functional Partners:
TM_0759
Acyltransferase, putative; Similar to GB:AE000666 percent identity: 63.45; identified by sequence similarity; putative.
 
   
 0.862
TM_0583
Lipopolysaccharide biosynthesis protein; Similar to GB:Pyro_h percent identity: 71.97; identified by sequence similarity; putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.697
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
  
 0.694
TM_0585
Lipopolysaccharide biosynthesis protein BplA; Similar to PID:992971 percent identity: 58.43; identified by sequence similarity; putative.
  
    0.661
TM_0761
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.658
TM_0610
Lipopolysaccharide biosynthesis protein; Similar to PID:992974 percent identity: 66.29; identified by sequence similarity; putative; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
    0.561
TM_0758
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
   0.537
TM_0620
Lipopolysaccharide biosynthesis protein; Similar to GP:1276886 percent identity: 50.35; identified by sequence similarity; putative.
 
  
 0.470
TM_0757
Hypothetical protein; Identified by sequence similarity; putative.
  
  0.456
TM_0862
Glucose-1-phosphate thymidylyltransferase; Similar to PID:1001492 PID:1001590 percent identity: 71.27; identified by sequence similarity; putative.
  
 
 0.445
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.