STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0816Transcriptional regulator, putative, Mar family; Similar to GB:AL009126 percent identity: 53.64; identified by sequence similarity; putative. (142 aa)    
Predicted Functional Partners:
TM_0817
Hypothetical protein; Identified by sequence similarity; putative.
       0.783
norM
Conserved hypothetical protein; Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
  
  
 0.585
TM_0818
Lipopolysaccharide biosynthesis protein, putative; Similar to GP:2209208 percent identity: 60.39; identified by sequence similarity; putative; Belongs to the glycosyltransferase 26 family.
       0.547
TM_0819
Uracil permease; Similar to GB:X76083 SP:P41006 PID:431231 percent identity: 69.41; identified by sequence similarity; putative.
       0.441
TM_0110
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 59.47; identified by sequence similarity; putative.
   
 
 0.435
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.