STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0824astB/chuR-related protein; Similar to GB:AE000782 percent identity: 51.47; identified by sequence similarity; putative. (482 aa)    
Predicted Functional Partners:
TM_0823
Transcriptional regulator, TetR family; Similar to GB:AE000657 percent identity: 53.14; identified by sequence similarity; putative.
  
    0.788
TM_0825
astB/chuR-related protein; Similar to GB:AE000782 percent identity: 55.52; identified by sequence similarity; putative.
 
    
0.617
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.613
TM_0609
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.596
TM_0827
ABC transporter, ATP-binding protein, putative; Similar to PID:2108228 percent identity: 57.14; identified by sequence similarity; putative.
 
     0.490
TM_1053
Cationic outer membrane protein; Similar to GB:M34854 SP:P31519 PID:155479 percent identity: 53.85; identified by sequence similarity; putative.
  
     0.481
TM_1075
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.451
TM_0842
Response regulator; Similar to PID:1651932 percent identity: 56.68; identified by sequence similarity; putative.
 
  
 0.435
TM_0774
Conserved hypothetical protein; Similar to SP:P32729 GB:Z18631 PID:49318 GB:AL009126 percent identity: 56.38; identified by sequence similarity; putative.
  
     0.425
TM_0930
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58222 PID:1591501 percent identity: 48.77; identified by sequence similarity; putative.
  
    0.423
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.