Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0879Ferredoxin; Identified by sequence similarity; putative. (65 aa)    
Predicted Functional Partners:
TM_0878
Pyruvate:ferredoxin 2-oxidoreductase-related protein; Similar to GB:Pyro_h percent identity: 68.24; identified by sequence similarity; putative.
 
  
  0.971
TM_1217
Glutamate synthase, beta subunit; Similar to PID:2244618 percent identity: 58.52; identified by sequence similarity; putative.
  
 
  0.897
TM_1164
2-oxoacid ferredoxin oxidoreductase, alpha subunit; Similar to GB:AE000666 percent identity: 68.99; identified by sequence similarity; putative.
    
 0.861
TM_0406
Keto/oxoacid ferredoxin oxidoreductase, gamma subunit, putative; Similar to GB:L77117 PID:1591240 percent identity: 59.77; identified by sequence similarity; putative.
 
  
  0.857
TM_1425
Fe-hydrogenase, subunit beta; Similar to GP:2865516 percent identity: 100.00; identified by sequence similarity; putative.
    
 0.847
TM_0010
NADP-reducing hydrogenase, subunit C; Similar to GB:U07229 PID:466365 percent identity: 78.67; identified by sequence similarity; putative.
    
 0.844
TM_0405
Keto/oxoacid ferredoxin oxidoreductase, beta subunit, putative; Similar to GB:L77117 PID:1591241 percent identity: 69.14; identified by sequence similarity; putative.
    
  0.836
TM_1165
2-oxoacid ferredoxin oxidoreductase, beta subunit; Similar to GB:AE000666 percent identity: 77.82; identified by sequence similarity; putative.
    
  0.836
TM_1758
2-oxoisovalerate oxidoreductase, gamma subunit, putative; Similar to GB:AE000666 percent identity: 61.67; identified by sequence similarity; putative.
    
  0.836
TM_1759
2-oxoisovalerate oxidoreductase, beta subunit, putative; Similar to GB:AE000666 percent identity: 68.12; identified by sequence similarity; putative.
    
  0.834
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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