Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0974Hypothetical protein; Identified by sequence similarity; putative. (96 aa)    
Predicted Functional Partners:
TM_0656
Conserved hypothetical protein; Similar to SP:P38522 GB:U00096 PID:1742120 PID:1742129 PID:1787557 percent identity: 56.60; identified by sequence similarity; putative.
  
  
 0.751
TM_0814
N-acetylglucosamine-6-phosphate deacetylase; Similar to GB:AL009126 percent identity: 56.57; identified by sequence similarity; putative.
  
  
 0.592
TM_1010
Hypothetical protein; Identified by sequence similarity; putative.
  
    0.539
TM_1459
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 59.38; identified by sequence similarity; putative.
  
    0.539
TM_0973
Methyl-accepting chemoreceptor-related protein; Similar to GB:L26016 PID:415694 percent identity: 80.82; identified by sequence similarity; putative.
       0.501
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.478
TM_1723
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 61.44; identified by sequence similarity; putative.
  
 
 0.437
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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