STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1002Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 78.36; identified by sequence similarity; putative. (184 aa)    
Predicted Functional Partners:
TM_1004
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 74.81; identified by sequence similarity; putative.
     0.977
TM_1003
Transposase-related protein; Similar to GB:L77117 SP:Q58161 PID:1591465 percent identity: 52.76; identified by sequence similarity; putative.
       0.773
TM_0999
Hypothetical protein; Identified by sequence similarity; putative.
       0.447
TM_1000
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57607 PID:1590904 percent identity: 61.34; identified by sequence similarity; putative; Belongs to the UPF0332 family.
       0.447
TM_1001
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57606 PID:1498910 percent identity: 65.43; identified by sequence similarity; putative.
       0.447
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.