STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1027Hypothetical protein; Identified by sequence similarity; putative. (111 aa)    
Predicted Functional Partners:
TM_1026
Transposase, putative; Similar to GB:L77117 SP:Q58161 PID:1591465 percent identity: 55.70; identified by sequence similarity; putative.
       0.590
TM_1028
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 60.48; identified by sequence similarity; putative.
       0.412
TM_1029
ABC transporter, permease protein, putative; Similar to SP:P42333 percent identity: 50.27; identified by sequence similarity; putative.
       0.412
TM_1030
Transcriptional regulator, TetR family; Similar to GB:S87512 SP:P43506 PID:623036 PID:247052 percent identity: 48.00; identified by sequence similarity; putative.
       0.405
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.