STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1028ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 60.48; identified by sequence similarity; putative. (293 aa)    
Predicted Functional Partners:
TM_1029
ABC transporter, permease protein, putative; Similar to SP:P42333 percent identity: 50.27; identified by sequence similarity; putative.
 
 0.986
TM_1030
Transcriptional regulator, TetR family; Similar to GB:S87512 SP:P43506 PID:623036 PID:247052 percent identity: 48.00; identified by sequence similarity; putative.
 
   
 0.835
TM_1064
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42064 PID:677943 GB:AL009126 percent identity: 72.95; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   
 
0.751
TM_1152
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 75.08; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   
 
0.570
TM_0764
Hypothetical protein; Identified by sequence similarity; putative.
  
 0.564
TM_1404
Antibiotic ABC transporter, transmembrane protein, putative; Similar to GB:AE000782 percent identity: 77.87; identified by sequence similarity; putative.
 
  0.504
ecfA1
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (Probable). Expression of the complex plus RibU in E.coli allows riboflavin uptake; uptake does not occur in the absence of RibU or the EcfA1A2T complex.
 
 
 
0.503
TM_0074
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 81.32; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   
 
0.498
TM_1138
Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:D12589 SP:P30293 GB:X52093 PID:217074 percent identity: 74.02; identified by sequence similarity; putative.
  
 
0.490
TM_1328
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 53.42; identified by sequence similarity; putative.
  
 
0.429
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.