STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1029ABC transporter, permease protein, putative; Similar to SP:P42333 percent identity: 50.27; identified by sequence similarity; putative. (263 aa)    
Predicted Functional Partners:
TM_1028
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 60.48; identified by sequence similarity; putative.
 
 0.986
TM_1030
Transcriptional regulator, TetR family; Similar to GB:S87512 SP:P43506 PID:623036 PID:247052 percent identity: 48.00; identified by sequence similarity; putative.
 
     0.804
TM_0389
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 65.97; identified by sequence similarity; putative.
  
 0.734
TM_0544
ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 64.44; identified by sequence similarity; putative.
  
 0.734
TM_0765
ABC transporter, ATP-binding protein; Similar to GB:L77117 PID:1499865 percent identity: 61.42; identified by sequence similarity; putative.
  
 0.734
TM_0793
ABC transporter, ATP-binding protein; Similar to PID:1707742 percent identity: 64.94; identified by sequence similarity; putative.
  
 0.734
TM_1302
ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 63.20; identified by sequence similarity; putative.
  
 0.734
TM_1403
Antibiotic ABC transporter, ATP-binding protein, putative; Similar to GB:Pyro_h percent identity: 85.85; identified by sequence similarity; putative.
  
 0.734
TM_1638
ABC transporter, ATP-binding protein; Similar to GB:AE000783 percent identity: 57.47; identified by sequence similarity; putative.
  
 0.734
TM_1317
astB/chuR-related protein; Similar to SP:Q02550 PID:143939 percent identity: 46.97; identified by sequence similarity; putative.
  
     0.442
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.