STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1032Permease, putative; Similar to GB:X73124 SP:P39589 PID:413945 GB:AL009126 percent identity: 48.48; identified by sequence similarity; putative. (381 aa)    
Predicted Functional Partners:
TM_1031
Glutaredoxin; Similar to GB:M60116 SP:P23171 PID:144907 percent identity: 73.61; identified by sequence similarity; putative.
       0.542
TM_1060
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 49.74; identified by sequence similarity; putative.
  
     0.460
TM_0432
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GB:M77351 SP:Q00749 PID:153737 percent identity: 55.25; identified by sequence similarity; putative.
  
     0.448
TM_1011
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 66.29; identified by sequence similarity; putative.
  
     0.413
TM_1133
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 46.32; identified by sequence similarity; putative.
 
     0.408
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.