STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1054ABC transporter, ATP-binding protein; Similar to GB:AE000783 percent identity: 70.94; identified by sequence similarity; putative. (236 aa)    
Predicted Functional Partners:
TM_1735
Conserved hypothetical protein; Similar to PID:1001350 PID:1001356 percent identity: 50.28; identified by sequence similarity; putative.
 
 0.993
TM_1137
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D90223 SP:P21628 GB:M64046 PID:216865 percent identity: 62.72; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.906
TM_1053
Cationic outer membrane protein; Similar to GB:M34854 SP:P31519 PID:155479 percent identity: 53.85; identified by sequence similarity; putative.
  
    0.823
TM_1055
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 71.79; identified by sequence similarity; putative.
       0.819
TM_1052
comEA protein-related protein; Similar to GB:L15202 SP:P39694 PID:289260 PID:1303796 GB:AL009126 percent identity: 75.81; identified by sequence similarity; putative.
  
    0.795
TM_1049
Endoglucanase; Similar to GB:L77117 SP:Q57975 PID:1591260 percent identity: 60.24; identified by sequence similarity; putative.
       0.791
TM_1050
Endoglucanase; Similar to SP:P55742 percent identity: 64.71; identified by sequence similarity; putative.
       0.791
TM_1051
Hypothetical protein; Identified by sequence similarity; putative.
       0.791
TM_1048
Endoglucanase; Similar to GB:L77117 SP:Q57975 PID:1591260 percent identity: 57.58; identified by sequence similarity; putative.
       0.788
minC
Septum site-determining protein MinC, putative; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization (By similarity). Belongs to the MinC family.
       0.787
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.