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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1066Oligopeptide ABC transporter, permease protein; Similar to SP:P42062 PID:677946 GB:AL009126 percent identity: 62.93; identified by sequence similarity; putative. (327 aa)    
Predicted Functional Partners:
TM_1065
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000657 percent identity: 67.80; identified by sequence similarity; putative.
 
  0.963
TM_1067
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 51.34; identified by sequence similarity; putative.
 
  0.930
TM_0059
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 65.90; identified by sequence similarity; putative.
 
  0.852
TM_0056
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative; Similar to GB:J05433 SP:P23843 GB:M60918 PID:1183023 PID:147014 percent identity: 50.16; identified by sequence similarity; putative.
  
  0.835
TM_0309
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 53.42; identified by sequence similarity; putative.
  
  0.835
TM_0533
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 71.65; identified by sequence similarity; putative.
 
 
  0.833
TM_1063
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42065 PID:677944 GB:AL009126 percent identity: 75.31; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  0.811
TM_1064
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42064 PID:677943 GB:AL009126 percent identity: 72.95; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  0.811
TM_1748
Oligopeptide ABC transporter, permease protein; Similar to GB:M57689 SP:P24139 GB:X56347 PID:143606 PID:40007 percent identity: 64.69; identified by sequence similarity; putative.
 
 
  0.636
TM_0531
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 60.12; identified by sequence similarity; putative.
  
  0.613
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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