STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1089TRK system potassium uptake protein TrkH; Similar to GB:AE000666 percent identity: 56.87; identified by sequence similarity; putative. (495 aa)    
Predicted Functional Partners:
TM_1057
Potassium channel, putative; Similar to PID:1652235 percent identity: 60.06; identified by sequence similarity; putative.
  
 
 0.932
hisS
histidyl-tRNA synthetase; Similar to GB:AL009126 percent identity: 66.83; identified by sequence similarity; putative.
       0.789
TM_1091
Hypothetical protein; Identified by sequence similarity; putative.
       0.690
TM_1092
Hypothetical protein; Identified by sequence similarity; putative.
       0.690
TM_1087
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 70.75; identified by sequence similarity; putative.
     
 0.624
TM_1094
RNA methyltransferase, putative; Similar to GB:AL009126 percent identity: 57.52; identified by sequence similarity; putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.584
argS
arginyl-tRNA synthetase; Similar to SP:P46906 PID:971336 PID:2224756 GB:AL009126 percent identity: 67.62; identified by sequence similarity; putative.
       0.575
TM_1512
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.521
TM_1294
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 52.00; identified by sequence similarity; putative.
 
     0.472
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.