STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1094RNA methyltransferase, putative; Similar to GB:AL009126 percent identity: 57.52; identified by sequence similarity; putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (439 aa)    
Predicted Functional Partners:
TM_1556
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
     0.927
argS
arginyl-tRNA synthetase; Similar to SP:P46906 PID:971336 PID:2224756 GB:AL009126 percent identity: 67.62; identified by sequence similarity; putative.
  
    0.829
TM_1092
Hypothetical protein; Identified by sequence similarity; putative.
       0.659
TM_1091
Hypothetical protein; Identified by sequence similarity; putative.
       0.654
TM_1089
TRK system potassium uptake protein TrkH; Similar to GB:AE000666 percent identity: 56.87; identified by sequence similarity; putative.
       0.586
hisS
histidyl-tRNA synthetase; Similar to GB:AL009126 percent identity: 66.83; identified by sequence similarity; putative.
  
    0.585
TM_0748
Conserved hypothetical protein; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
   
  
 0.569
TM_1512
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
  
 0.521
pheT
phenylalanyl-tRNA synthetase, beta subunit; Similar to GB:AE000657 percent identity: 61.38; identified by sequence similarity; putative; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
  
 0.506
trmB
Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.489
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.