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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1112Hypothetical protein; Identified by sequence similarity; putative. (89 aa)    
Predicted Functional Partners:
TM_1111
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_1113
Hypothetical protein; Identified by sequence similarity; putative.
       0.533
TM_1114
Hypothetical protein; Identified by sequence similarity; putative.
       0.496
TM_1367
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 75.00; identified by sequence similarity; putative.
      
 0.456
TM_1081
Anti-sigma factor antagonist, putative; In the phosphorylated form it could act as an anti-anti-sigma factor that counteracts an anti-sigma factor and thus releases a sigma factor from inhibition; Belongs to the anti-sigma-factor antagonist family.
      
 0.444
TM_1115
Hypothetical protein; Identified by sequence similarity; putative.
       0.401
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.