STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1116Hypothetical protein; Identified by sequence similarity; putative. (543 aa)    
Predicted Functional Partners:
TM_1117
General secretion pathway protein D, putative; Similar to GB:L13865 SP:P34750 PID:459551 percent identity: 47.19; identified by sequence similarity; putative; Belongs to the bacterial secretin family.
 
     0.951
TM_1118
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_1319
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 52.55; identified by sequence similarity; putative.
  
     0.727
TM_1328
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 53.42; identified by sequence similarity; putative.
  
     0.700
TM_1317
astB/chuR-related protein; Similar to SP:Q02550 PID:143939 percent identity: 46.97; identified by sequence similarity; putative.
  
     0.660
TM_0088
comE protein, putative; Similar to SP:P31772 GB:L42023 PID:1003754 PID:1222365 PID:148874 percent identity: 65.23; identified by sequence similarity; putative; Belongs to the bacterial secretin family.
 
     0.648
TM_0984
Hypothetical protein; Protects the bacterial cell from peptidases.
  
     0.630
TM_1115
Hypothetical protein; Identified by sequence similarity; putative.
       0.589
TM_1113
Hypothetical protein; Identified by sequence similarity; putative.
  
 
  0.580
TM_0663
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 59.49; identified by sequence similarity; putative.
  
     0.559
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.