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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1117General secretion pathway protein D, putative; Similar to GB:L13865 SP:P34750 PID:459551 percent identity: 47.19; identified by sequence similarity; putative; Belongs to the bacterial secretin family. (387 aa)    
Predicted Functional Partners:
TM_1116
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.951
TM_1118
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_0094
General secretion pathway protein F, putative; Similar to GB:AE000657 percent identity: 58.04; identified by sequence similarity; putative.
 
 
 
 0.704
TM_1735
Conserved hypothetical protein; Similar to PID:1001350 PID:1001356 percent identity: 50.28; identified by sequence similarity; putative.
  
   
 0.697
TM_0837
General secretion pathway protein E; Similar to GB:AE000657 percent identity: 67.38; identified by sequence similarity; putative.
 
 
 
 0.677
omp-alpha
Outer membrane protein alpha; Links the outer membrane to the inner membrane. Long fibrous protein that could serve to separate the two membranes.
  
     0.661
TM_1729
Outer membrane protein; Similar to SP:Q01969 GB:X68276 PID:49141 GB:AE000512 percent identity: 54.10; identified by sequence similarity; putative.
  
     0.654
TM_1054
ABC transporter, ATP-binding protein; Similar to GB:AE000783 percent identity: 70.94; identified by sequence similarity; putative.
 
     0.641
TM_1115
Hypothetical protein; Identified by sequence similarity; putative.
       0.589
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
     0.532
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.