Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1120Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; Similar to SP:P10904 GB:U00039 GB:M33735 PID:43244 PID:466589 percent identity: 51.42; identified by sequence similarity; putative. (436 aa)    
Predicted Functional Partners:
TM_1121
Glycerol-3-phosphate ABC transporter, permease protein; Similar to SP:P10905 GB:U00039 PID:43247 PID:466588 GB:U00096 percent identity: 61.32; identified by sequence similarity; putative.
 
  0.981
TM_1122
Glycerol-3-phosphate ABC transporter, permease protein; Similar to SP:P10906 GB:U00039 PID:43248 PID:466587 GB:U00096 percent identity: 59.48; identified by sequence similarity; putative.
 
  0.978
TM_0598
Sugar ABC transporter, permease protein; Similar to PID:1652996 percent identity: 64.22; identified by sequence similarity; putative.
  
  0.862
TM_0596
Sugar ABC transporter, permease protein; Similar to PID:2337834 percent identity: 61.03; identified by sequence similarity; putative.
  
  0.827
TM_0812
Sugar ABC transporter, permease protein, putative; Similar to PID:1652996 percent identity: 63.26; identified by sequence similarity; putative.
 
  0.805
TM_1853
Sugar ABC transporter, permease protein; Similar to GB:X66092 PID:296356 percent identity: 66.04; identified by sequence similarity; putative.
  
  0.778
mcp2
Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation.
 
      0.736
TM_0419
Sugar ABC transporter, permease protein; Similar to GB:AL009126 percent identity: 54.04; identified by sequence similarity; putative.
  
  0.732
TM_0811
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 68.25; identified by sequence similarity; putative.
  
  0.726
TM_1854
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 60.89; identified by sequence similarity; putative.
  
  0.710
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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