STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1135Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to SP:P04816 GB:U00039 GB:J01644 GB:M29378 GB:V00301 percent identity: 49.86; identified by sequence similarity; putative. (370 aa)    
Predicted Functional Partners:
TM_1136
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D12589 SP:P30295 GB:X52093 PID:217072 percent identity: 68.09; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
TM_1137
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D90223 SP:P21628 GB:M64046 PID:216865 percent identity: 62.72; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
TM_1138
Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:D12589 SP:P30293 GB:X52093 PID:217074 percent identity: 74.02; identified by sequence similarity; putative.
 
 
 0.999
TM_1139
Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 74.48; identified by sequence similarity; putative.
 
 
 0.999
TM_0827
ABC transporter, ATP-binding protein, putative; Similar to PID:2108228 percent identity: 57.14; identified by sequence similarity; putative.
  
 
 0.704
TM_1140
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 62.41; identified by sequence similarity; putative.
 
    0.672
TM_1132
moxR protein, putative; Similar to GB:AL009126 percent identity: 77.10; identified by sequence similarity; putative.
       0.548
TM_1133
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 46.32; identified by sequence similarity; putative.
       0.548
TM_1134
Hypothetical protein; Identified by sequence similarity; putative.
       0.548
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
  
    0.506
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.