STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1139Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 74.48; identified by sequence similarity; putative. (239 aa)    
Predicted Functional Partners:
TM_1135
Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to SP:P04816 GB:U00039 GB:J01644 GB:M29378 GB:V00301 percent identity: 49.86; identified by sequence similarity; putative.
 
 
 0.999
TM_1136
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D12589 SP:P30295 GB:X52093 PID:217072 percent identity: 68.09; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
TM_1137
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D90223 SP:P21628 GB:M64046 PID:216865 percent identity: 62.72; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
TM_1138
Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:D12589 SP:P30293 GB:X52093 PID:217074 percent identity: 74.02; identified by sequence similarity; putative.
 
 
0.999
TM_1140
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 62.41; identified by sequence similarity; putative.
 
    0.844
TM_0827
ABC transporter, ATP-binding protein, putative; Similar to PID:2108228 percent identity: 57.14; identified by sequence similarity; putative.
  
 
 0.789
TM_0592
Amino acid ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 72.86; identified by sequence similarity; putative.
 
    
 0.596
TM_1302
ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 63.20; identified by sequence similarity; putative.
 
   
 
0.561
TM_1141
Cytochrome C-type biogenesis protein, putative; Similar to GB:L42023 SP:P44202 PID:1007567 PID:1221597 PID:1205690 percent identity: 56.06; identified by sequence similarity; putative.
       0.545
TM_1638
ABC transporter, ATP-binding protein; Similar to GB:AE000783 percent identity: 57.47; identified by sequence similarity; putative.
 
  
 
0.529
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.